PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01078g00514.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 511aa    MW: 57459.2 Da    PI: 5.5952
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01078g00514.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-08460508247
                               SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
           Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                               +rW++ E++ l  +v+++G g+W++I   +    + R + ++k++w+++
  Peaxi162Scf01078g00514.1 460 KRWSALEEDTLRSGVQKYGVGNWRLIFDNFReifEERNPGDLKDKWRNL 508
                               69********************************99***********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.277454511IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.8E-10455509IPR009057Homeodomain-like
SuperFamilySSF466893.28E-13456509IPR009057Homeodomain-like
SMARTSM007176.1E-8458511IPR001005SANT/Myb domain
CDDcd116609.82E-15460509No hitNo description
PfamPF002491.1E-6460508IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MDIDISRWIL EFILSQPLED NILNAIIEVV PLPKDDVRLN KALILARIQS EISNGSVSEK  60
ILKYLDLMEQ LYYQEGVETS EAMKAAYCAV AVDCTVRFLG KETEKLKYVE AVGRIWIKRI  120
NNMTENVGVS SKELWKWGKE IEEAVWDDSC HHNLIMRGHS IVAVDAVKAF VKEAKDRIGP  180
SFLEVMAEAL MRDDAVKACL SWGNKDEDDE SRRRTQSLSS AGQDLAGTKH HLDNLDTMNV  240
CGKYVQSLLY YICFITVIYL LAEAKMQNAL PSRNHVAFKR TKGTLAGVCK GVKIVDSTEQ  300
GVEASRGQDD LLSSPKIDEA QESLKLSSLE LRAAVKDPLP EALDLAETLM SLDKDNSAQQ  360
PVEDDQRAPQ LVVDGNGVVQ ANGGNEDDQH CCNHNAAPKP SLMARNDTAH IFEWNDSIDN  420
LSGGSPSSDR RFILPSPRRV KVSPLKKYEF KKVSTRRKAK RWSALEEDTL RSGVQKYGVG  480
NWRLIFDNFR EIFEERNPGD LKDKWRNLTS S
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587848.10.0PREDICTED: uncharacterized protein LOC104085504 isoform X1
RefseqXP_009587849.10.0PREDICTED: uncharacterized protein LOC104085504 isoform X1
RefseqXP_009587850.10.0PREDICTED: uncharacterized protein LOC104085504 isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37742439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06910.11e-15TRF-like 7